Welcome to the Chaigne lab!

We do (mostly) photoacoustic imaging (more precisely tomography) to image deep (> 1 mm) structures non-invasively. We design, fabricate and use optical sensors of ultrasound to high resolution images (down to single-cell). We also have (or had) a bunch of projects mixing acoustics/pressure and optics in diverse ways.

We are part of the Fresnel Institute in Marseille, in the (sunny) south of France, a unique place gathering experimentalists and theoreticians, with expertise ranging from cutting-edge optical intrumentation for biomedical imaging, thin film deposition, and advanced signal processing and image reconstruction. And we need it all for our projects!

Research

In short, we want to send lasers into mouse brains to create sound so that we can measure the electrical activity of neurons.

We are developing advanced optical techniques to image non-invasively the electrical activity of single neurons in mice at large depths (> 1 mm). In this regime, much of the light has been scattered multiple times by the brain tissue and therefore cannot be used to build high resolution images (even with 2 or 3-photon microscopy). So we add another kind of waves to help us out: ultrasounds. When absorbers (like hemoglobin, or calcium indicators) heat up under pulsed illumination, they emit pressure waves that are not scattered by soft tissue, and can therefore be externally measured to reconstruct the inner optical absorption: this is the principle of photoacoustic imaging. But the conventional piezoelectric detectors are not sensitive enough at high frequencies needed to resolve single neurons. So we add one more laser, in order to optically measure sound and reach the desired resolution. We believe that this new technique can have a significant impact in neurobiology, by providing non-invasive access to the deeper layers of the cortex and to the hippocampus.

Publications

Real-time electro-optic dual comb detection of ultrasound waves
D. Chatterjee, L. Etien, S. Boivinet, H. Rigneault, T. Chaigne, A. Mussot. Journal of Physics B: Atomic, Molecular and Optical Physics, 2025.

Optical wavefront shaping in deep tissue using photoacoustic feedback
F. Xia, I. Leite, R. Prevedel, T. Chaigne. Journal of Physics: Photonics, 2024.

The mechanism for directional hearing in fish
J. Veith*, T. Chaigne*, A. Svanidze, L. E. Dressler, M. Hoffmann, B. Gerhardt, B. Judkewitz. Nature, 2024.

Fast interrogation wavelength tuning for all-optical photoacoustic imaging
J. Saucourt, A. Moreau, J. Lumeau, H. Rigneault, T. Chaigne. Optics Express, 2023.

Roadmap on wavefront shaping and deep imaging in complex media
S. Gigan, O. Katz, H. B. de Aguiar, E. R. Andresen, A. Aubry, J. Bertolotti, E. Bossy, D. Bouchet, J. Brake, S. Brasselet, Y. Bromberg, H. Cao, T. Chaigne, Z. Cheng, W. Choi, T. Čižmár, M. Cui, V. R. Curtis, H. Defienne, M. Hofer, R. Horisaki, R. Horstmeyer, N. Ji, A. K. LaViolette, J. Mertz, C. Moser, A. P. Mosk, N. C. Pégard, R. Piestun, S. Popoff, D. B. Phillips, D. Psaltis, B. Rahmani, H. Rigneault, S. Rotter, L. Tian, I. M. Vellekoop, L. Waller, L. Wang, T. Weber, S. Xiao, C. Xu, A. Yamilov, C. Yang, H. Yılmaz. Journal of Physics: Photonics, 2022.

Transparent Danionella translucida as a genetically tractable vertebrate brain model
L. Schulze, J. Henninger, M. Kadobianskyi, T. Chaigne, A. Faustino, N. Hakiy, S. Albadri, M. Schuelke, L. Maler, F. Del Bene, B. Judkewitz. Nature Methods, 2018.

Scattering correlations of time-gated light
M. Kadobianskyi, I. N. Papadopoulos, T. Chaigne, R. Horstmeyer, B. Judkewitz. Optica, 2018.

Super-resolution photoacoustic imaging via flow induced absorption fluctuations
T. Chaigne*, B. Arnal*, S. Vilov, E. Bossy, O. Katz. Optica, 2017.

Photoacoustic imaging beyond the acoustic diffraction-limit with dynamic speckle illumination and sparse joint support recovery
E. Hojman, T. Chaigne, O. Solomon, S. Gigan, E. Bossy, Y. C. Eldar, O. Katz. Optics Express, 2017.

Super-resolution photoacoustic fluctuation imaging with multiple speckle illumination
T. Chaigne, J. Gateau, M. Allain, O. Katz, S. Gigan, A. Sentenac, E. Bossy. Optica, 2016.

Improving photoacoustic-guided optical focusing in scattering media by spectrally filtered detection
T. Chaigne, J. Gateau, O. Katz, C. Boccara, S. Gigan, E. Bossy. Optics Letters, 2014.

Controlling light in scattering media non-invasively using the photoacoustic transmission matrix
T. Chaigne, O. Katz, A. C. Boccara, M. Fink, E. Bossy, S. Gigan. Nature Photonics, 2014.

Improving visibility in photoacoustic imaging using dynamic speckle illumination
J. Gateau, T. Chaigne, O. Katz, S. Gigan, E. Bossy. Optics Letters, 2013.

Team
Thomas Chaigne

Thomas Chaigne

Group leader, CNRS research fellow (CV)

Fabio Motetta

Fabio Motetta

PhD student

Ashar Noor

Ashar Noor

Engineer

Hiring
We are always looking for curious and motivated candidates with interest ranging from physics to neurobiology, with a taste for making what you can’t buy and deciphering what you don’t understand.

Contact me

Where to find us

Office 029, Lab 132b, Institut Fresnel, 52 avenue Escadrille Normandie Niémen, Marseille, France

Map to find the lab at Institut Fresnel